dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02158
Location and strand information: 13871 - 14902 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02159
Location and strand information: 14943 - 15239 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02160
Location and strand information: 15446 - 16315 (-)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02161
Location and strand information: 16529 - 19297 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.995
Protein molecular weight: 105138.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02162
Location and strand information: 19400 - 19678 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02163
Location and strand information: 20053 - 20997 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.012
Protein molecular weight: 35713.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02164
Location and strand information: 21130 - 22629 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.5146
Protein molecular weight: 56673.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02165
Location and strand information: 22657 - 23784 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.1953
Protein molecular weight: 43197.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02166
Location and strand information: 23805 - 25196 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7238
Protein molecular weight: 51925.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_30|CGC1
Gene ID: MGYG000002293_02167
Location and strand information: 25371 - 26117 (+)
Family: 3.A.1.125.1
Protein type: TC
Protein description: Lipoprotein-releasing system ATP-binding protein LolD

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002293_02161	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000002293_02163	GH106_e0\|3.2.1.174	pectin
MGYG000002293_02164	GH106_e0\|3.2.1.174	pectin
MGYG000002293_02165	GH105_e14\|3.2.1.172	pectin
MGYG000002293_02166	GH28_e95\|3.2.1.-	pectin

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002293_02158	L-rhamnose-proton symporter	TC	13871	14902	+	2.A.7.6.1
MGYG000002293_02159	L-rhamnose mutarotase	null	14943	15239	+	rhaM
MGYG000002293_02160	Rhamnulose-1-phosphate aldolase	null	15446	16315	-	Aldolase_II
MGYG000002293_02161	Beta-galactosidase	CAZyme	16529	19297	+	GH2
MGYG000002293_02162	hypothetical protein	null	19400	19678	+	No domain
MGYG000002293_02163	hypothetical protein	CAZyme	20053	20997	+	GH106
MGYG000002293_02164	hypothetical protein	CAZyme	21130	22629	+	GH106
MGYG000002293_02165	hypothetical protein	CAZyme	22657	23784	+	GH105
MGYG000002293_02166	hypothetical protein	CAZyme	23805	25196	+	GH28
MGYG000002293_02167	Lipoprotein-releasing system ATP-binding protein LolD	TC	25371	26117	+	3.A.1.125.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature